Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm14000-201ENSMUST00000118670 233 ntBASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Gm12451-201ENSMUST00000121636 633 ntBASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Gm23810-201ENSMUST00000175150 74 ntBASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Gm19211-201ENSMUST00000200251 1206 ntBASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 AC150661.1-201ENSMUST00000222563 495 ntBASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 AC165260.6-204ENSMUST00000225571 3508 ntBASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Gm42679-201ENSMUST00000197086 2906 ntBASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc180J3QNE4 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm26575-201ENSMUST00000181714 2232 ntBASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm43429-201ENSMUST00000197889 2251 ntBASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm15422-201ENSMUST00000117453 541 ntBASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm11796-201ENSMUST00000120208 972 ntBASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Zfp572-202ENSMUST00000184208 1078 ntBASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 AC154640.1-202ENSMUST00000227828 496 ntBASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc180J3QNE4 Gm10513-201ENSMUST00000194203 6468 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm26340-201ENSMUST00000102365 99 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm23768-201ENSMUST00000104440 131 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm13357-201ENSMUST00000120528 537 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm16016-201ENSMUST00000120831 550 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm16027-201ENSMUST00000161618 758 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm23968-201ENSMUST00000175047 125 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm19175-201ENSMUST00000199895 916 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Gm44943-201ENSMUST00000207254 300 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 AC154642.1-201ENSMUST00000224173 740 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Mir3068-201ENSMUST00000083004 136 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 AC154270.2-201ENSMUST00000226755 2306 ntBASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc180J3QNE4 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Gm14741-201ENSMUST00000120777 1009 ntBASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 CT009604.1-201ENSMUST00000223900 1328 ntBASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc180J3QNE4 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Gm12101-201ENSMUST00000121590 390 ntBASIC13□□□□□ -0.33
Ccdc180J3QNE4 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Gm5871-201ENSMUST00000176461 718 ntBASIC13□□□□□ -0.33
Ccdc180J3QNE4 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC13□□□□□ -0.33
Ccdc180J3QNE4 Gm37189-201ENSMUST00000192131 298 ntBASIC13□□□□□ -0.33
Ccdc180J3QNE4 Gm7441-201ENSMUST00000220697 1074 ntBASIC13□□□□□ -0.33
Ccdc180J3QNE4 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ccdc180J3QNE4 n-R5s95-201ENSMUST00000082684 118 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms