Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.45□□□□□ -1.06
Traf1P39428 Gm19324-201ENSMUST00000213229 1169 ntBASIC8.45□□□□□ -1.06
Traf1P39428 AC122539.1-201ENSMUST00000219925 329 ntBASIC8.45□□□□□ -1.06
Traf1P39428 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC8.45□□□□□ -1.06
Traf1P39428 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Traf1P39428 AC106830.2-201ENSMUST00000226624 943 ntBASIC8.45□□□□□ -1.06
Traf1P39428 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Traf1P39428 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Klf5-202ENSMUST00000226784 2852 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.45□□□□□ -1.06
Traf1P39428 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.45□□□□□ -1.06
Traf1P39428 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.45□□□□□ -1.06
Traf1P39428 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Traf1P39428 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Traf1P39428 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Traf1P39428 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Traf1P39428 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Gm42969-201ENSMUST00000199858 3631 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Traf1P39428 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm12944-201ENSMUST00000119262 463 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Gm11320-201ENSMUST00000119434 463 ntBASIC8.44□□□□□ -1.06
Traf1P39428 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.44□□□□□ -1.06
Traf1P39428 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.44□□□□□ -1.06
Traf1P39428 Gm24011-201ENSMUST00000157732 268 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Gm22262-201ENSMUST00000158713 86 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Mir8120-201ENSMUST00000185035 139 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Gm5261-201ENSMUST00000185860 713 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC8.44□□□□□ -1.06
Traf1P39428 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC8.44□□□□□ -1.06
Traf1P39428 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm38373-201ENSMUST00000192042 288 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Gm8101-201ENSMUST00000192796 478 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Gm37017-201ENSMUST00000195266 747 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.44□□□□□ -1.06
Traf1P39428 Gm17611-202ENSMUST00000220613 814 ntBASIC8.44□□□□□ -1.06
Traf1P39428 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm43533-201ENSMUST00000202933 2936 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.44□□□□□ -1.06
Traf1P39428 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.44□□□□□ -1.06
Traf1P39428 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Traf1P39428 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Traf1P39428 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Traf1P39428 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Traf1P39428 Gm6181-201ENSMUST00000117187 264 ntBASIC8.43□□□□□ -1.06
Traf1P39428 Gm14631-201ENSMUST00000119067 594 ntBASIC8.43□□□□□ -1.06
Traf1P39428 Gm15538-201ENSMUST00000121410 313 ntBASIC8.43□□□□□ -1.06
Traf1P39428 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms