Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm22795-201ENSMUST00000157233 118 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Gm23598-201ENSMUST00000157262 144 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Gm24735-201ENSMUST00000158859 118 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm6633-201ENSMUST00000173851 270 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Gm26738-201ENSMUST00000181312 601 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Mir6999-201ENSMUST00000183498 61 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm3841-201ENSMUST00000191399 451 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC5.74□□□□□ -1.49
Sdc1P18828 Igkv8-22-201ENSMUST00000199501 367 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Gm43694-201ENSMUST00000200773 1119 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sdc1P18828 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm19254-201ENSMUST00000204828 294 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 AC108846.3-201ENSMUST00000214078 247 ntTSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 AC124778.1-201ENSMUST00000216013 162 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Gm18504-201ENSMUST00000220917 929 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 CT030135.2-201ENSMUST00000225255 893 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 AC160930.2-201ENSMUST00000226608 303 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm6887-201ENSMUST00000080945 482 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Gm25259-201ENSMUST00000083048 193 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Sdc1P18828 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm37968-201ENSMUST00000195131 3201 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.74□□□□□ -1.49
Sdc1P18828 AC166574.5-201ENSMUST00000227438 1432 ntBASIC5.74□□□□□ -1.49
Sdc1P18828 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sdc1P18828 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Sdc1P18828 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Sdc1P18828 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm37863-201ENSMUST00000194911 1457 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm24542-201ENSMUST00000103870 110 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm3618-201ENSMUST00000112726 384 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm5915-201ENSMUST00000116136 454 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm23368-201ENSMUST00000116939 96 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm14278-201ENSMUST00000117381 878 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm14676-201ENSMUST00000117722 858 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm11997-201ENSMUST00000118697 313 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm4918-201ENSMUST00000119420 1084 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm11763-201ENSMUST00000119964 312 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm11307-201ENSMUST00000121088 929 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm11188-201ENSMUST00000122382 388 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm8865-201ENSMUST00000125697 430 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC5.73□□□□□ -1.49
Sdc1P18828 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm6838-201ENSMUST00000172851 582 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm21965-201ENSMUST00000177770 384 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm7426-201ENSMUST00000179046 404 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm5445-201ENSMUST00000180224 480 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Gm11109-201ENSMUST00000180289 384 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC5.73□□□□□ -1.49
Sdc1P18828 Mir6973a-201ENSMUST00000183646 78 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC5.73□□□□□ -1.49
Sdc1P18828 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Sdc1P18828 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms