Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm25546-201ENSMUST00000103977 132 ntBASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm22119-201ENSMUST00000175594 99 ntBASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm27617-201ENSMUST00000184321 168 ntBASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm18875-201ENSMUST00000188563 882 ntBASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm29759-201ENSMUST00000205860 327 ntBASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.36□□□□□ -1.07
Usp44Q8C2S0 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Mir697-201ENSMUST00000102316 109 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm12635-201ENSMUST00000117285 752 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Mir1930-201ENSMUST00000158799 84 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm17205-201ENSMUST00000168370 1207 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm26179-201ENSMUST00000177723 132 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm23018-201ENSMUST00000177928 109 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm17786-201ENSMUST00000182000 427 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm38373-201ENSMUST00000192042 288 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm10416-201ENSMUST00000197379 645 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm42673-201ENSMUST00000202676 337 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm9604-201ENSMUST00000211175 433 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 AC161374.1-201ENSMUST00000224191 794 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Usp44Q8C2S0 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Usp44Q8C2S0 Gm15105-201ENSMUST00000117777 204 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms