Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
Msh6P54276 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC9.18□□□□□ -0.94
Msh6P54276 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC9.18□□□□□ -0.94
Msh6P54276 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC9.18□□□□□ -0.94
Msh6P54276 Gm24826-202ENSMUST00000197298 216 ntBASIC9.18□□□□□ -0.94
Msh6P54276 Gm30517-201ENSMUST00000197350 772 ntBASIC9.18□□□□□ -0.94
Msh6P54276 Gm44471-201ENSMUST00000197963 100 ntBASIC9.18□□□□□ -0.94
Msh6P54276 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Msh6P54276 Ighv1-83-201ENSMUST00000199643 351 ntBASIC9.18□□□□□ -0.94
Msh6P54276 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC9.18□□□□□ -0.94
Msh6P54276 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC9.18□□□□□ -0.94
Msh6P54276 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC9.18□□□□□ -0.94
Msh6P54276 Gm2754-201ENSMUST00000223383 589 ntBASIC9.18□□□□□ -0.94
Msh6P54276 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Msh6P54276 Gm37535-201ENSMUST00000194442 2365 ntBASIC9.18□□□□□ -0.94
Msh6P54276 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Msh6P54276 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Msh6P54276 Phxr4-202ENSMUST00000216590 1391 ntBASIC9.17□□□□□ -0.94
Msh6P54276 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Gm8822-201ENSMUST00000118948 2347 ntBASIC9.17□□□□□ -0.94
Msh6P54276 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Gm24519-201ENSMUST00000104507 132 ntBASIC9.17□□□□□ -0.94
Msh6P54276 Gm14000-201ENSMUST00000118670 233 ntBASIC9.17□□□□□ -0.94
Msh6P54276 Gm6654-201ENSMUST00000118950 348 ntBASIC9.17□□□□□ -0.94
Msh6P54276 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm26323-201ENSMUST00000157743 175 ntBASIC9.17□□□□□ -0.94
Msh6P54276 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Msh6P54276 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC9.17□□□□□ -0.94
Msh6P54276 Gm44162-201ENSMUST00000203543 544 ntBASIC9.17□□□□□ -0.94
Msh6P54276 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC9.17□□□□□ -0.94
Msh6P54276 AC124184.1-201ENSMUST00000218167 283 ntBASIC9.17□□□□□ -0.94
Msh6P54276 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC9.17□□□□□ -0.94
Msh6P54276 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC9.17□□□□□ -0.94
Msh6P54276 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Gm37080-201ENSMUST00000194804 2404 ntBASIC9.17□□□□□ -0.94
Msh6P54276 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Msh6P54276 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Msh6P54276 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 AC161247.1-201ENSMUST00000217744 2295 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Apc-ps1-201ENSMUST00000119356 470 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC9.16□□□□□ -0.94
Msh6P54276 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Zfp572-202ENSMUST00000184208 1078 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Gm43555-201ENSMUST00000196588 310 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Gm2860-201ENSMUST00000199226 707 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC9.16□□□□□ -0.94
Msh6P54276 Gm44896-201ENSMUST00000206190 772 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 AC127242.3-201ENSMUST00000222009 580 ntBASIC9.16□□□□□ -0.94
Msh6P54276 AC165157.1-201ENSMUST00000222981 580 ntBASIC9.16□□□□□ -0.94
Msh6P54276 AC123917.1-201ENSMUST00000228063 1048 ntBASIC9.16□□□□□ -0.94
Msh6P54276 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Msh6P54276 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Msh6P54276 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Msh6P54276 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Msh6P54276 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms