Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.04□□□□□ -1.28
Cdh23Q99PF4 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.04□□□□□ -1.28
Cdh23Q99PF4 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Cdh23Q99PF4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Cdh23Q99PF4 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Cdh23Q99PF4 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.04□□□□□ -1.28
Cdh23Q99PF4 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cdh23Q99PF4 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Cdh23Q99PF4 Gm12242-201ENSMUST00000118824 738 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm4617-201ENSMUST00000178993 331 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm46223-201ENSMUST00000215196 675 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Mir700-201ENSMUST00000102169 79 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm27034-201ENSMUST00000182552 940 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm44565-201ENSMUST00000208194 269 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Col4a5-201ENSMUST00000112930 6285 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm36993-201ENSMUST00000192983 2980 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm15332-201ENSMUST00000118386 357 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Gm43794-201ENSMUST00000200971 692 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 CT030238.4-203ENSMUST00000227343 836 ntBASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Cdh23Q99PF4 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
Cdh23Q99PF4 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Cdh23Q99PF4 Gm43621-201ENSMUST00000202733 2022 ntBASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Mir5107-201ENSMUST00000175586 88 ntBASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.02□□□□□ -1.29
Cdh23Q99PF4 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 n-R5s36-201ENSMUST00000082998 119 ntBASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Cdh23Q99PF4 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms