Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm6044-201ENSMUST00000121819 499 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm13724-201ENSMUST00000122395 1155 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm23077-201ENSMUST00000157854 116 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm22392-201ENSMUST00000177971 107 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm27542-201ENSMUST00000184184 256 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm27185-201ENSMUST00000184296 247 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Mir6409-201ENSMUST00000184957 92 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm29525-201ENSMUST00000189844 699 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm29523-201ENSMUST00000191415 699 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm37578-201ENSMUST00000192256 1177 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm43542-201ENSMUST00000199505 379 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm18765-201ENSMUST00000203166 660 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm5885-202ENSMUST00000203357 528 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm25926-201ENSMUST00000082899 160 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm24696-201ENSMUST00000083878 134 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Gm10302-201ENSMUST00000174433 3535 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 AC164437.4-204ENSMUST00000227169 4024 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Clp1Q99LI9 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.37□□□□□ -1.07
Clp1Q99LI9 CT009536.1-201ENSMUST00000223774 2151 ntBASIC8.37□□□□□ -1.07
Clp1Q99LI9 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Zfp148-201ENSMUST00000089677 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm25614-201ENSMUST00000104013 133 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm14931-201ENSMUST00000111079 253 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm16007-201ENSMUST00000117837 286 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm14356-201ENSMUST00000118322 869 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm11348-201ENSMUST00000118813 318 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm4725-201ENSMUST00000151048 587 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm16297-201ENSMUST00000161466 459 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm20637-201ENSMUST00000175715 462 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Mir7212-201ENSMUST00000184098 61 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm29357-201ENSMUST00000186877 698 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm37241-201ENSMUST00000191736 523 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm43245-201ENSMUST00000197603 468 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 Gm43476-201ENSMUST00000197873 405 ntBASIC8.36□□□□□ -1.07
Clp1Q99LI9 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms