Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
StrcQ8VIM6 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
StrcQ8VIM6 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
StrcQ8VIM6 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
StrcQ8VIM6 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
StrcQ8VIM6 AC134577.3-201ENSMUST00000226490 3000 ntBASIC8.44□□□□□ -1.06
StrcQ8VIM6 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
StrcQ8VIM6 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm24434-201ENSMUST00000104081 132 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm15422-201ENSMUST00000117453 541 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm13352-201ENSMUST00000117515 262 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm27601-201ENSMUST00000184794 127 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm38237-201ENSMUST00000193366 376 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Igkv4-73-201ENSMUST00000199760 358 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 BC049739-201ENSMUST00000202626 660 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm46203-201ENSMUST00000218130 478 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 AC122290.1-201ENSMUST00000225631 1078 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm19972-201ENSMUST00000218180 5664 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 AC115746.1-201ENSMUST00000228949 3617 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm45746-201ENSMUST00000212623 2447 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm35808-201ENSMUST00000204769 2602 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm22426-201ENSMUST00000103811 96 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm18199-201ENSMUST00000173820 835 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm18191-201ENSMUST00000174624 824 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm25246-201ENSMUST00000175476 69 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm19195-201ENSMUST00000222018 511 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm20302-201ENSMUST00000080671 275 ntBASIC8.43□□□□□ -1.06
StrcQ8VIM6 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
StrcQ8VIM6 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.42□□□□□ -1.06
StrcQ8VIM6 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.42□□□□□ -1.06
StrcQ8VIM6 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.42□□□□□ -1.06
StrcQ8VIM6 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Gm43429-201ENSMUST00000197889 2251 ntBASIC8.42□□□□□ -1.06
StrcQ8VIM6 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.42□□□□□ -1.06
StrcQ8VIM6 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.42□□□□□ -1.06
StrcQ8VIM6 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Gm14380-201ENSMUST00000122298 431 ntBASIC8.42□□□□□ -1.06
StrcQ8VIM6 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC8.42□□□□□ -1.06
StrcQ8VIM6 Mir1960-201ENSMUST00000157488 78 ntBASIC8.42□□□□□ -1.06
StrcQ8VIM6 Gm9167-201ENSMUST00000182469 962 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 191.9 ms