Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm12842-201ENSMUST00000117298 476 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm13983-201ENSMUST00000118018 865 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm17217-201ENSMUST00000166613 469 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm20401-201ENSMUST00000173717 212 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm36935-201ENSMUST00000192526 292 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm5418-201ENSMUST00000206932 528 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm44943-201ENSMUST00000207254 300 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 AC126685.1-201ENSMUST00000221001 121 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm43789-201ENSMUST00000199275 2472 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Shank3Q4ACU6 Gm14733-201ENSMUST00000117680 133 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm23426-201ENSMUST00000122483 318 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Mir7211-201ENSMUST00000184071 63 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm18699-201ENSMUST00000190713 243 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm37322-201ENSMUST00000193409 337 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm8058-201ENSMUST00000217247 587 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 A1cf-203ENSMUST00000224400 1204 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm37289-201ENSMUST00000195409 1402 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm25346-201ENSMUST00000104509 128 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm5055-201ENSMUST00000215697 581 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Gm7252-201ENSMUST00000223284 456 ntBASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Shank3Q4ACU6 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Shank3Q4ACU6 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms