Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TcraP01849 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC5.23□□□□□ -1.57
TcraP01849 Gm11987-201ENSMUST00000118524 381 ntBASIC5.23□□□□□ -1.57
TcraP01849 Gm12710-201ENSMUST00000119011 216 ntBASIC5.23□□□□□ -1.57
TcraP01849 Gm24899-201ENSMUST00000158892 73 ntBASIC5.23□□□□□ -1.57
TcraP01849 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC5.23□□□□□ -1.57
TcraP01849 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 Mir199b-201ENSMUST00000175066 110 ntBASIC5.23□□□□□ -1.57
TcraP01849 Gm8357-201ENSMUST00000181115 1011 ntBASIC5.23□□□□□ -1.57
TcraP01849 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC5.23□□□□□ -1.57
TcraP01849 Gm29041-201ENSMUST00000189199 380 ntBASIC5.23□□□□□ -1.57
TcraP01849 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 Gm38306-201ENSMUST00000193954 237 ntBASIC5.23□□□□□ -1.57
TcraP01849 Gm37371-201ENSMUST00000194837 392 ntBASIC5.23□□□□□ -1.57
TcraP01849 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Gm18690-201ENSMUST00000204488 985 ntBASIC5.23□□□□□ -1.57
TcraP01849 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC5.23□□□□□ -1.57
TcraP01849 Gm44982-201ENSMUST00000208795 471 ntBASIC5.23□□□□□ -1.57
TcraP01849 Gm45299-201ENSMUST00000210199 420 ntBASIC5.23□□□□□ -1.57
TcraP01849 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.23□□□□□ -1.57
TcraP01849 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
TcraP01849 AC152946.3-201ENSMUST00000219424 280 ntBASIC5.23□□□□□ -1.57
TcraP01849 AC154506.2-201ENSMUST00000225481 1276 ntBASIC5.23□□□□□ -1.57
TcraP01849 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
TcraP01849 Gm5590-201ENSMUST00000059110 345 ntBASIC5.23□□□□□ -1.57
TcraP01849 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 AC154747.4-203ENSMUST00000225893 1384 ntBASIC5.23□□□□□ -1.57
TcraP01849 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.23□□□□□ -1.57
TcraP01849 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
TcraP01849 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC5.23□□□□□ -1.57
TcraP01849 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TcraP01849 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
TcraP01849 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TcraP01849 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC5.23□□□□□ -1.57
TcraP01849 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Gm43623-201ENSMUST00000199289 2663 ntBASIC5.22□□□□□ -1.57
TcraP01849 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.22□□□□□ -1.57
TcraP01849 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Gm19801-201ENSMUST00000218231 1882 ntBASIC5.22□□□□□ -1.57
TcraP01849 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TcraP01849 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.22□□□□□ -1.57
TcraP01849 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC5.22□□□□□ -1.57
TcraP01849 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Gm16409-201ENSMUST00000100510 747 ntBASIC5.22□□□□□ -1.57
TcraP01849 Ighv1-67-201ENSMUST00000103538 294 ntBASIC5.22□□□□□ -1.57
TcraP01849 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Gm16221-201ENSMUST00000117331 393 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm8688-201ENSMUST00000118240 969 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm12604-201ENSMUST00000118382 380 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm13006-201ENSMUST00000118683 214 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm11796-201ENSMUST00000120208 972 ntBASIC5.22□□□□□ -1.57
TcraP01849 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm9143-201ENSMUST00000120745 745 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC5.22□□□□□ -1.57
TcraP01849 Gm6689-201ENSMUST00000130905 481 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC5.22□□□□□ -1.57
TcraP01849 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Gm20702-201ENSMUST00000176181 460 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm10182-201ENSMUST00000178676 273 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm26436-201ENSMUST00000180325 132 ntBASIC5.22□□□□□ -1.57
TcraP01849 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TcraP01849 Mir6974-201ENSMUST00000184381 83 ntBASIC5.22□□□□□ -1.57
TcraP01849 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC5.22□□□□□ -1.57
TcraP01849 Ighv10-2-201ENSMUST00000195182 298 ntBASIC5.22□□□□□ -1.57
TcraP01849 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TcraP01849 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 Gm4780-201ENSMUST00000213206 1242 ntBASIC5.22□□□□□ -1.57
TcraP01849 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC5.22□□□□□ -1.57
TcraP01849 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TcraP01849 Gm19161-201ENSMUST00000217958 737 ntBASIC5.22□□□□□ -1.57
TcraP01849 AC122539.2-201ENSMUST00000220207 404 ntBASIC5.22□□□□□ -1.57
TcraP01849 AC207128.1-201ENSMUST00000225928 799 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms