Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm26063-201ENSMUST00000083378 107 ntBASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Abhd4-202ENSMUST00000180359 2508 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Etfdh-202ENSMUST00000120992 2233 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Nkx6-1Q99MA9 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 AC107453.1-201ENSMUST00000227490 3268 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm45629-201ENSMUST00000209629 2546 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm15574-201ENSMUST00000119937 405 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm23657-201ENSMUST00000122623 294 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm24893-201ENSMUST00000122745 369 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm16363-201ENSMUST00000132460 877 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm18848-201ENSMUST00000182069 792 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Mir6340-201ENSMUST00000183857 119 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm28688-201ENSMUST00000187301 268 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm28356-202ENSMUST00000187566 858 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm37989-201ENSMUST00000195202 803 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Mir1892-201ENSMUST00000197752 80 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm44243-201ENSMUST00000204323 692 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm44128-201ENSMUST00000204909 219 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm9652-201ENSMUST00000209345 163 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm18860-201ENSMUST00000212029 764 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 AC163667.2-201ENSMUST00000223769 791 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 AC099629.1-201ENSMUST00000226778 464 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 AC124709.1-201ENSMUST00000227296 620 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Gm44752-201ENSMUST00000207140 3305 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Mrpl48-201ENSMUST00000064334 1865 ntBASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nkx6-1Q99MA9 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms