Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Smg1Q8BKX6 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Smg1Q8BKX6 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Smg1Q8BKX6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Smg1Q8BKX6 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Smg1Q8BKX6 AC158115.1-201ENSMUST00000222830 3182 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm25603-201ENSMUST00000158361 105 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm18726-201ENSMUST00000218175 2010 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 AC158988.1-201ENSMUST00000226731 2624 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm2762-207ENSMUST00000202739 2665 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm12842-201ENSMUST00000117298 476 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm14836-201ENSMUST00000118567 471 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm43331-201ENSMUST00000197991 1689 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm22714-201ENSMUST00000116894 78 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm18943-201ENSMUST00000207357 1216 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 AC154558.1-201ENSMUST00000222278 415 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Gm37906-201ENSMUST00000192050 3035 ntBASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Smg1Q8BKX6 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Mir6963-201ENSMUST00000183535 71 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Gm18117-201ENSMUST00000187720 742 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Gm43850-201ENSMUST00000202021 578 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 AV026068-216ENSMUST00000223874 328 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 AV026068-218ENSMUST00000223980 575 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 AC154627.1-201ENSMUST00000228799 1286 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Gm12773-201ENSMUST00000120134 587 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Gm20702-201ENSMUST00000176181 460 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Gm28467-201ENSMUST00000190981 318 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Gm40598-201ENSMUST00000222953 547 ntBASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Smg1Q8BKX6 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms