Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm29354-201ENSMUST00000187613 696 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm38022-201ENSMUST00000191762 403 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm37322-201ENSMUST00000193409 337 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm7972-201ENSMUST00000208434 1137 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm34424-201ENSMUST00000213400 782 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm2840-201ENSMUST00000048361 411 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Gm10764-202ENSMUST00000220397 2335 ntBASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Vps54Q5SPW0 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm11342-203ENSMUST00000224879 1324 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm13221-201ENSMUST00000121712 430 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Mir1930-201ENSMUST00000158799 84 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm25640-201ENSMUST00000175378 125 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm26587-201ENSMUST00000180795 989 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm37669-201ENSMUST00000192184 820 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm43926-201ENSMUST00000203978 430 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm18559-201ENSMUST00000208249 604 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 AC173482.3-201ENSMUST00000225492 1212 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Vps54Q5SPW0 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm26417-201ENSMUST00000104274 135 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm13878-201ENSMUST00000117986 577 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm14727-201ENSMUST00000118526 525 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm13900-201ENSMUST00000119402 498 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm15153-201ENSMUST00000119867 274 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm12104-201ENSMUST00000120359 979 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm14721-201ENSMUST00000121381 525 ntBASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.61□□□□□ -1.03
Vps54Q5SPW0 Gm7426-201ENSMUST00000179046 404 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms