Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm44797-201ENSMUST00000208780 1837 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm24519-201ENSMUST00000104507 132 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm9506-201ENSMUST00000118516 320 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm12634-201ENSMUST00000122157 992 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm27030-201ENSMUST00000182551 464 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm30517-201ENSMUST00000197350 772 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm44411-201ENSMUST00000204172 349 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Mir106b-201ENSMUST00000083580 82 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm38697-201ENSMUST00000198061 1746 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm45477-201ENSMUST00000200213 5498 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gm37321-201ENSMUST00000195742 1872 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC9.61□□□□□ -0.87
Sf3b2Q3UJB0 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm15575-201ENSMUST00000119414 1581 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm12573-201ENSMUST00000118158 286 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm14741-201ENSMUST00000120777 1009 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm25395-201ENSMUST00000157343 272 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm18191-201ENSMUST00000174624 824 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm5654-201ENSMUST00000217787 475 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm35638-201ENSMUST00000220724 652 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 AC154380.1-201ENSMUST00000226804 720 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm8464-201ENSMUST00000140208 2200 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Gm4750-202ENSMUST00000152262 2200 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Sf3b2Q3UJB0 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 CT009757.4-201ENSMUST00000221520 2541 ntBASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Gm42656-201ENSMUST00000201506 2305 ntBASIC9.59□□□□□ -0.87
Sf3b2Q3UJB0 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms