Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 AC137117.3-201ENSMUST00000226265 485 ntBASIC7.99□□□□□ -1.13
Tpm1P58771 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Tpm1P58771 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC7.99□□□□□ -1.13
Tpm1P58771 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Tpm1P58771 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.99□□□□□ -1.13
Tpm1P58771 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Tpm1P58771 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC7.99□□□□□ -1.13
Tpm1P58771 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Tpm1P58771 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Tpm1P58771 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Tpm1P58771 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.99□□□□□ -1.13
Tpm1P58771 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Tpm1P58771 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.99□□□□□ -1.13
Tpm1P58771 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Tpm1P58771 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Tpm1P58771 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Tpm1P58771 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Tpm1P58771 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.98□□□□□ -1.13
Tpm1P58771 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Tpm1P58771 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Tpm1P58771 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.98□□□□□ -1.13
Tpm1P58771 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.98□□□□□ -1.13
Tpm1P58771 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Tpm1P58771 Gm12034-201ENSMUST00000119032 399 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm13282-201ENSMUST00000121577 545 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm5809-201ENSMUST00000121854 529 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm11188-201ENSMUST00000122382 388 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Mir1907-201ENSMUST00000122509 90 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm25842-201ENSMUST00000122590 322 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC7.98□□□□□ -1.13
Tpm1P58771 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.98□□□□□ -1.13
Tpm1P58771 Gm4246-201ENSMUST00000172822 216 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.98□□□□□ -1.13
Tpm1P58771 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC7.98□□□□□ -1.13
Tpm1P58771 Gm28677-202ENSMUST00000186904 615 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm40319-201ENSMUST00000199785 481 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC7.98□□□□□ -1.13
Tpm1P58771 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.98□□□□□ -1.13
Tpm1P58771 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC7.98□□□□□ -1.13
Tpm1P58771 AC132384.10-201ENSMUST00000217862 1204 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 AC122539.2-201ENSMUST00000220207 404 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Tpm1P58771 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
Tpm1P58771 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Tpm1P58771 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Tpm1P58771 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.98□□□□□ -1.13
Tpm1P58771 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Tpm1P58771 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Tpm1P58771 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Tpm1P58771 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Tpm1P58771 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm6823-201ENSMUST00000120791 1839 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Tpm1P58771 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.97□□□□□ -1.13
Tpm1P58771 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Tpm1P58771 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Tpm1P58771 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm22022-201ENSMUST00000104355 127 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Gm22275-201ENSMUST00000122470 310 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Tpm1P58771 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm23740-201ENSMUST00000157385 100 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Gm25721-201ENSMUST00000157496 171 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Gm25265-201ENSMUST00000158520 347 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm32102-201ENSMUST00000196885 241 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm18562-201ENSMUST00000209949 915 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC7.97□□□□□ -1.13
Tpm1P58771 Gm18378-201ENSMUST00000216245 628 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC7.97□□□□□ -1.13
Tpm1P58771 CT571271.1-201ENSMUST00000227071 670 ntBASIC7.97□□□□□ -1.13
Tpm1P58771 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Tpm1P58771 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Tpm1P58771 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms