Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Gm24530-201ENSMUST00000157948 288 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm25692-201ENSMUST00000175444 125 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm23187-201ENSMUST00000175746 86 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm26784-201ENSMUST00000181666 410 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox6P40645 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox6P40645 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.81□□□□□ -1.32
Sox6P40645 Gm33778-201ENSMUST00000216884 704 ntBASIC6.81□□□□□ -1.32
Sox6P40645 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.81□□□□□ -1.32
Sox6P40645 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Sox6P40645 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Sox6P40645 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox6P40645 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.81□□□□□ -1.32
Sox6P40645 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Sox6P40645 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Sox6P40645 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox6P40645 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Sox6P40645 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox6P40645 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
Sox6P40645 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox6P40645 Mir763-201ENSMUST00000103249 120 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm24373-201ENSMUST00000104393 132 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox6P40645 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Gm16523-201ENSMUST00000121253 592 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm11688-201ENSMUST00000122145 308 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm15843-201ENSMUST00000146593 529 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Mir3078-201ENSMUST00000175231 87 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Mir1231-201ENSMUST00000175639 81 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox6P40645 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox6P40645 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox6P40645 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox6P40645 Gm4545-201ENSMUST00000190797 603 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm37481-201ENSMUST00000195176 403 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm42424-201ENSMUST00000198319 376 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm9497-201ENSMUST00000199908 538 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox6P40645 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox6P40645 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Sox6P40645 Gm4270-201ENSMUST00000209666 406 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm45399-201ENSMUST00000209955 1016 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC6.8□□□□□ -1.32
Sox6P40645 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 AC162183.1-201ENSMUST00000224843 472 ntBASIC6.8□□□□□ -1.32
Sox6P40645 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Sox6P40645 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Sox6P40645 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.8□□□□□ -1.32
Sox6P40645 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox6P40645 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox6P40645 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.8□□□□□ -1.32
Sox6P40645 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox6P40645 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox6P40645 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms