Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm18700-201ENSMUST00000185791 553 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Gm42443-201ENSMUST00000198084 1155 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Col18a1P39061 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC9.52□□□□□ -0.88
Col18a1P39061 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC9.52□□□□□ -0.88
Col18a1P39061 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC9.52□□□□□ -0.88
Col18a1P39061 AC122290.1-201ENSMUST00000225631 1078 ntBASIC9.52□□□□□ -0.88
Col18a1P39061 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Col18a1P39061 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Col18a1P39061 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC9.52□□□□□ -0.88
Col18a1P39061 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Col18a1P39061 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Col18a1P39061 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Col18a1P39061 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 Gm16204-201ENSMUST00000117864 1897 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 Gm24434-201ENSMUST00000104081 132 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Col18a1P39061 Gm15502-201ENSMUST00000121449 208 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Col18a1P39061 AC155266.1-201ENSMUST00000220762 904 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 AV026068-216ENSMUST00000223874 328 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 AV026068-218ENSMUST00000223980 575 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 AC164426.1-201ENSMUST00000225745 929 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 AC122034.1-201ENSMUST00000227641 595 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 Mir135a-1-201ENSMUST00000083473 90 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 AC101875.1-201ENSMUST00000222666 2223 ntBASIC9.52□□□□□ -0.89
Col18a1P39061 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Col18a1P39061 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Col18a1P39061 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 AC154597.1-201ENSMUST00000224095 2713 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Gm43331-201ENSMUST00000197991 1689 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Gm42444-201ENSMUST00000199366 4558 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 AC111010.1-203ENSMUST00000227287 1548 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 AC165260.6-206ENSMUST00000223884 3698 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col18a1P39061 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC9.51□□□□□ -0.89
Col18a1P39061 Gm16487-201ENSMUST00000105048 4037 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Gm28359-201ENSMUST00000187470 1322 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Mir760-201ENSMUST00000103257 119 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Gm11984-201ENSMUST00000118142 766 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Gm3351-201ENSMUST00000193454 505 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Gm37629-201ENSMUST00000193635 1050 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Gm43850-201ENSMUST00000202021 578 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Gm18600-201ENSMUST00000207205 505 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 AC151904.3-201ENSMUST00000219266 895 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 CT010480.1-201ENSMUST00000223612 363 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 AC154806.5-204ENSMUST00000228900 867 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC9.51□□□□□ -0.89
Col18a1P39061 Snora21-201ENSMUST00000082967 137 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Gm10205-201ENSMUST00000087431 234 ntBASIC9.51□□□□□ -0.89
Col18a1P39061 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Gm8362-201ENSMUST00000168790 1762 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Col18a1P39061 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Olfr52-202ENSMUST00000215138 2751 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col18a1P39061 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col18a1P39061 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col18a1P39061 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col18a1P39061 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Gm38056-201ENSMUST00000193928 5027 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Col18a1P39061 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC9.5□□□□□ -0.89
Col18a1P39061 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Gm21301-201ENSMUST00000189476 699 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC9.5□□□□□ -0.89
Col18a1P39061 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Col18a1P39061 Gm45448-201ENSMUST00000211739 209 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 Gm45887-201ENSMUST00000212672 2998 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 AC125064.1-201ENSMUST00000225801 295 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 AC113125.2-201ENSMUST00000226837 362 ntBASIC9.5□□□□□ -0.89
Col18a1P39061 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Col18a1P39061 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Col18a1P39061 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col18a1P39061 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms