Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm37669-201ENSMUST00000192184 820 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Gm43459-201ENSMUST00000202093 331 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm45626-201ENSMUST00000210093 361 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Gm4042-201ENSMUST00000216946 637 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 AC124601.1-201ENSMUST00000220531 135 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 CT009711.2-201ENSMUST00000225352 934 ntBASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.51□□□□□ -1.05
Col1a1P11087 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Col1a1P11087 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Col1a1P11087 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm36401-201ENSMUST00000194255 2028 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm8995-202ENSMUST00000208417 3490 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm25785-201ENSMUST00000104129 125 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Gm13176-201ENSMUST00000117910 477 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 BC064078-201ENSMUST00000122939 570 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Gm25342-201ENSMUST00000157459 122 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm37177-201ENSMUST00000193768 417 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm36758-201ENSMUST00000222594 310 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Col1a1P11087 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm43612-201ENSMUST00000196087 3207 ntBASIC8.5□□□□□ -1.05
Col1a1P11087 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Col1a1P11087 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Col1a1P11087 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC8.49□□□□□ -1.05
Col1a1P11087 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 AC155270.1-201ENSMUST00000221626 4028 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC8.49□□□□□ -1.05
Col1a1P11087 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col1a1P11087 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col1a1P11087 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col1a1P11087 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Col1a1P11087 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Col1a1P11087 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Col1a1P11087 Gm15422-201ENSMUST00000117453 541 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Gm14747-201ENSMUST00000149888 984 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.49□□□□□ -1.05
Col1a1P11087 Gm38022-201ENSMUST00000191762 403 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Gm36965-201ENSMUST00000193797 394 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Gm35108-201ENSMUST00000194321 699 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Gm33191-201ENSMUST00000195604 699 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 AC122844.1-201ENSMUST00000195971 107 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Gm9240-201ENSMUST00000206527 742 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms