Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mir455-201ENSMUST00000093594 82 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Vps53Q8CCB4 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm13744-201ENSMUST00000118953 850 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm15362-201ENSMUST00000121459 388 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm25180-201ENSMUST00000157746 115 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm23077-201ENSMUST00000157854 116 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm16107-201ENSMUST00000162523 862 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm9286-201ENSMUST00000173586 508 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm20637-201ENSMUST00000175715 462 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm44112-201ENSMUST00000204787 372 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm2398-201ENSMUST00000218347 883 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm6419-201ENSMUST00000097166 429 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Vps53Q8CCB4 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm37520-201ENSMUST00000194883 2672 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm5759-201ENSMUST00000119203 811 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm11726-201ENSMUST00000121028 424 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Mir7212-201ENSMUST00000184098 61 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm27185-201ENSMUST00000184296 247 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Mir6987-201ENSMUST00000184789 73 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm27458-201ENSMUST00000185108 121 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm37883-201ENSMUST00000194970 725 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm33778-201ENSMUST00000216884 704 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.58□□□□□ -1.04
Vps53Q8CCB4 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Vps53Q8CCB4 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms