Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Oacyl-202ENSMUST00000117694 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 n-R5s82-201ENSMUST00000104213 109 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm24471-201ENSMUST00000104485 131 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm13171-201ENSMUST00000117233 391 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm15032-201ENSMUST00000118547 411 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm14283-201ENSMUST00000119763 325 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm11498-201ENSMUST00000120660 949 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm16523-201ENSMUST00000121253 592 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm11662-201ENSMUST00000121389 1193 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm11403-201ENSMUST00000122195 369 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm13738-201ENSMUST00000122437 469 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm25341-201ENSMUST00000157461 268 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm24363-201ENSMUST00000158440 311 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm6541-201ENSMUST00000165542 561 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm22259-201ENSMUST00000178926 107 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm27851-201ENSMUST00000183529 63 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm27444-201ENSMUST00000184157 137 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Npn2-202ENSMUST00000189275 235 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm17781-201ENSMUST00000195232 649 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm2142-201ENSMUST00000197899 589 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm43854-201ENSMUST00000200418 394 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm45327-201ENSMUST00000211612 565 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 AC167229.1-201ENSMUST00000220057 469 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 CT025689.5-201ENSMUST00000224316 986 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 AC131997.2-201ENSMUST00000227452 362 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Snord47-201ENSMUST00000083034 77 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Jam2-202ENSMUST00000114195 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 AC154634.1-201ENSMUST00000225225 2394 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm43092-201ENSMUST00000202986 1854 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm3555-201ENSMUST00000160287 1395 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm37483-201ENSMUST00000194382 1484 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Igbp1-201ENSMUST00000033570 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Nox1-204ENSMUST00000159259 1581 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Polq-201ENSMUST00000054034 8552 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim35Q8C006 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim35Q8C006 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC9.96□□□□□ -0.81
Trim35Q8C006 Fam186b-201ENSMUST00000109100 3187 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trim35Q8C006 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim35Q8C006 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Trim35Q8C006 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trim35Q8C006 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trim35Q8C006 Gm16026-206ENSMUST00000163068 2741 ntBASIC9.96□□□□□ -0.81
Trim35Q8C006 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim35Q8C006 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trim35Q8C006 Rpa1-201ENSMUST00000000767 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trim35Q8C006 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim35Q8C006 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim35Q8C006 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm15033-201ENSMUST00000118188 673 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm12235-201ENSMUST00000118596 170 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm11890-201ENSMUST00000119585 417 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm13281-201ENSMUST00000120871 567 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC9.96□□□□□ -0.82
Trim35Q8C006 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm25362-201ENSMUST00000158854 105 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm3239-202ENSMUST00000169675 519 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm24368-201ENSMUST00000175388 106 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm4705-201ENSMUST00000177415 354 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm5976-201ENSMUST00000180794 996 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm8707-201ENSMUST00000183325 980 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm18802-201ENSMUST00000186270 888 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm37339-201ENSMUST00000194142 392 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm2287-201ENSMUST00000197417 1084 ntBASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC9.96□□□□□ -0.82
Trim35Q8C006 Gm7478-201ENSMUST00000201054 581 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms