Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm18117-201ENSMUST00000187720 742 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm35108-201ENSMUST00000194321 699 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm33191-201ENSMUST00000195604 699 ntBASIC7.43□□□□□ -1.22
HttP42859 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
HttP42859 Gm24695-201ENSMUST00000083877 83 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm33167-201ENSMUST00000201933 2643 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.43□□□□□ -1.22
HttP42859 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
HttP42859 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.43□□□□□ -1.22
HttP42859 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
HttP42859 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
HttP42859 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
HttP42859 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
HttP42859 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.43□□□□□ -1.22
HttP42859 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC7.43□□□□□ -1.22
HttP42859 Gm27034-201ENSMUST00000182552 940 ntBASIC7.43□□□□□ -1.22
HttP42859 Gm35013-201ENSMUST00000197218 832 ntBASIC7.43□□□□□ -1.22
HttP42859 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HttP42859 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.43□□□□□ -1.22
HttP42859 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC7.42□□□□□ -1.22
HttP42859 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
HttP42859 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Mir5107-201ENSMUST00000175586 88 ntBASIC7.42□□□□□ -1.22
HttP42859 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.42□□□□□ -1.22
HttP42859 Gm4742-201ENSMUST00000200261 771 ntBASIC7.42□□□□□ -1.22
HttP42859 AC154583.1-201ENSMUST00000224788 655 ntBASIC7.42□□□□□ -1.22
HttP42859 Olfr467-201ENSMUST00000084756 927 ntBASIC7.42□□□□□ -1.22
HttP42859 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Gm10205-201ENSMUST00000087431 234 ntBASIC7.42□□□□□ -1.22
HttP42859 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
HttP42859 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Olfr687-201ENSMUST00000098154 938 ntBASIC7.42□□□□□ -1.22
HttP42859 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC7.42□□□□□ -1.22
HttP42859 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
HttP42859 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Gm38001-201ENSMUST00000192900 3761 ntBASIC7.42□□□□□ -1.22
HttP42859 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.42□□□□□ -1.22
HttP42859 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
HttP42859 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Gm13013-201ENSMUST00000119087 523 ntBASIC7.42□□□□□ -1.22
HttP42859 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC7.42□□□□□ -1.22
HttP42859 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC7.42□□□□□ -1.22
HttP42859 Gm2089-201ENSMUST00000218294 479 ntBASIC7.42□□□□□ -1.22
HttP42859 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.42□□□□□ -1.22
HttP42859 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
HttP42859 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
HttP42859 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.42□□□□□ -1.22
HttP42859 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
HttP42859 Gm10302-201ENSMUST00000174433 3535 ntBASIC7.42□□□□□ -1.22
HttP42859 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.42□□□□□ -1.22
HttP42859 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.41□□□□□ -1.22
HttP42859 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC7.41□□□□□ -1.22
HttP42859 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
HttP42859 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HttP42859 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7.41□□□□□ -1.22
HttP42859 Gm37375-201ENSMUST00000193859 387 ntBASIC7.41□□□□□ -1.22
HttP42859 Gm37385-201ENSMUST00000195223 387 ntBASIC7.41□□□□□ -1.22
HttP42859 Gm43798-201ENSMUST00000202056 394 ntBASIC7.41□□□□□ -1.22
HttP42859 Gm9535-201ENSMUST00000218499 768 ntBASIC7.41□□□□□ -1.22
HttP42859 Gm17849-201ENSMUST00000219788 853 ntBASIC7.41□□□□□ -1.22
HttP42859 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.41□□□□□ -1.22
HttP42859 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
HttP42859 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HttP42859 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
HttP42859 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HttP42859 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms