Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Gm37200-201ENSMUST00000193689 2172 ntBASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Gm5120-201ENSMUST00000215231 2414 ntBASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc188F6WEU2 AC118222.1-201ENSMUST00000222184 2973 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Ldb2-207ENSMUST00000199534 2541 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm21026-201ENSMUST00000218628 1345 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Mir466j-201ENSMUST00000116876 122 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm14891-201ENSMUST00000117378 596 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm15181-201ENSMUST00000120142 177 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm9672-201ENSMUST00000166437 425 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm26528-201ENSMUST00000181965 283 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm4556-201ENSMUST00000217808 355 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm5612-201ENSMUST00000053326 375 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 AC122397.1-201ENSMUST00000228650 2819 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 BC026762-201ENSMUST00000206555 2503 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm37978-201ENSMUST00000194736 2915 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 F730016J06Rik-202ENSMUST00000128888 3699 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc188F6WEU2 Samd3-201ENSMUST00000060716 1874 ntAPPRIS P4 TSL 5 BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 AC153955.4-201ENSMUST00000217069 2752 ntBASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Mrpl11-201ENSMUST00000025836 2882 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Gm22774-201ENSMUST00000102084 109 ntBASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Gm11501-201ENSMUST00000118039 581 ntBASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Gm13835-201ENSMUST00000118459 685 ntBASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Gm11416-201ENSMUST00000119111 863 ntBASIC7.55□□□□□ -1.2
Ccdc188F6WEU2 Gm11320-201ENSMUST00000119434 463 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms