Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim35Q8C006 Rhbdd1-201ENSMUST00000027322 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim35Q8C006 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim35Q8C006 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim35Q8C006 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Lipe-204ENSMUST00000149349 3713 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Pycard-201ENSMUST00000033056 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Trim35Q8C006 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm4991-201ENSMUST00000118899 1552 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Dkk3-201ENSMUST00000033036 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Trib2-201ENSMUST00000020922 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Nr2e1-202ENSMUST00000105498 780 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm11929-201ENSMUST00000118175 945 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm4943-201ENSMUST00000132879 424 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim35Q8C006 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm23332-201ENSMUST00000157424 275 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm17782-201ENSMUST00000174345 880 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm20463-201ENSMUST00000174756 366 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm22994-201ENSMUST00000175422 82 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm9399-201ENSMUST00000175771 639 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm23402-201ENSMUST00000178130 107 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm26189-201ENSMUST00000179879 107 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm26928-201ENSMUST00000182674 572 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm4960-201ENSMUST00000182928 1001 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm18033-201ENSMUST00000186678 550 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm8525-201ENSMUST00000189674 861 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm31373-201ENSMUST00000194403 737 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm9632-201ENSMUST00000195934 643 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm43405-201ENSMUST00000198642 337 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm9269-201ENSMUST00000221661 578 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Try4-201ENSMUST00000031913 801 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm24319-201ENSMUST00000083389 107 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm8848-201ENSMUST00000197270 1343 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Epha5-203ENSMUST00000113399 5166 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm8428-201ENSMUST00000159919 1784 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Gm7061-201ENSMUST00000118127 1416 ntBASIC9.98□□□□□ -0.81
Trim35Q8C006 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Trim35Q8C006 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim35Q8C006 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm45797-201ENSMUST00000212759 1921 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm6351-203ENSMUST00000139828 1542 ntAPPRIS P5 TSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm37879-201ENSMUST00000193112 1995 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC9.97□□□□□ -0.81
Trim35Q8C006 Wdr6-201ENSMUST00000068700 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Gm2987-201ENSMUST00000187673 1693 ntBASIC9.97□□□□□ -0.81
Trim35Q8C006 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Mat1a-201ENSMUST00000047286 3208 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trim35Q8C006 Phf21a-208ENSMUST00000111294 3710 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms