Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm10155-201ENSMUST00000084598 483 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Clca2-201ENSMUST00000040465 3986 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 D7Ertd443e-203ENSMUST00000172947 2559 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Spred1-202ENSMUST00000110901 1440 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Mrpl48-201ENSMUST00000064334 1865 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm42847-201ENSMUST00000201732 2553 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm37536-201ENSMUST00000194710 2491 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm43219-201ENSMUST00000197972 1937 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm12258-201ENSMUST00000093768 2524 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Supt7l-201ENSMUST00000065388 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm14648-201ENSMUST00000119328 483 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Rpl21-ps15-201ENSMUST00000121545 483 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm12929-201ENSMUST00000122406 370 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm24893-201ENSMUST00000122745 369 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Rpl37rt-202ENSMUST00000124641 294 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm25180-201ENSMUST00000157746 115 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm17164-201ENSMUST00000169013 506 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm22642-201ENSMUST00000175352 252 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm26802-201ENSMUST00000181066 2144 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm43012-201ENSMUST00000198569 937 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Plut-203ENSMUST00000201192 569 ntTSL 3 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm5305-201ENSMUST00000204010 746 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC6.72□□□□□ -1.33
Col8a1Q00780 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Rpl21-ps7-201ENSMUST00000077420 483 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 AC122887.1-201ENSMUST00000219265 2722 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.72□□□□□ -1.33
Col8a1Q00780 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col8a1Q00780 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col8a1Q00780 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col8a1Q00780 Gm37821-201ENSMUST00000195476 1843 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col8a1Q00780 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Col8a1Q00780 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
Col8a1Q00780 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col8a1Q00780 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Col8a1Q00780 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col8a1Q00780 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col8a1Q00780 CU024890.1-201ENSMUST00000221361 2019 ntBASIC6.71□□□□□ -1.33
Col8a1Q00780 Gm16497-201ENSMUST00000222024 2842 ntTSL 2 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm4849-201ENSMUST00000188428 2246 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms