Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
NcanP55066 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
NcanP55066 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.87□□□□□ -1.15
NcanP55066 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NcanP55066 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NcanP55066 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NcanP55066 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC7.87□□□□□ -1.15
NcanP55066 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
NcanP55066 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC7.87□□□□□ -1.15
NcanP55066 Gm42519-201ENSMUST00000199282 3656 ntBASIC7.87□□□□□ -1.15
NcanP55066 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NcanP55066 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm26340-201ENSMUST00000102365 99 ntBASIC7.87□□□□□ -1.15
NcanP55066 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.87□□□□□ -1.15
NcanP55066 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.87□□□□□ -1.15
NcanP55066 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC7.87□□□□□ -1.15
NcanP55066 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm25505-201ENSMUST00000157220 246 ntBASIC7.87□□□□□ -1.15
NcanP55066 Gm24011-201ENSMUST00000157732 268 ntBASIC7.87□□□□□ -1.15
NcanP55066 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.87□□□□□ -1.15
NcanP55066 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm9423-201ENSMUST00000183173 997 ntBASIC7.87□□□□□ -1.15
NcanP55066 Mir7220-201ENSMUST00000183978 60 ntBASIC7.87□□□□□ -1.15
NcanP55066 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm20932-201ENSMUST00000189115 694 ntBASIC7.87□□□□□ -1.15
NcanP55066 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm44411-201ENSMUST00000204172 349 ntBASIC7.87□□□□□ -1.15
NcanP55066 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm4042-201ENSMUST00000216946 637 ntBASIC7.87□□□□□ -1.15
NcanP55066 AC125405.2-201ENSMUST00000227862 383 ntBASIC7.87□□□□□ -1.15
NcanP55066 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NcanP55066 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NcanP55066 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NcanP55066 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NcanP55066 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC7.87□□□□□ -1.15
NcanP55066 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.87□□□□□ -1.15
NcanP55066 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
NcanP55066 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
NcanP55066 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
NcanP55066 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 AC165260.6-202ENSMUST00000224959 1958 ntBASIC7.86□□□□□ -1.15
NcanP55066 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
NcanP55066 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Gm20236-201ENSMUST00000193037 4540 ntBASIC7.86□□□□□ -1.15
NcanP55066 Gm37094-201ENSMUST00000193352 4540 ntBASIC7.86□□□□□ -1.15
NcanP55066 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
NcanP55066 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Gm25311-201ENSMUST00000104136 132 ntBASIC7.86□□□□□ -1.15
NcanP55066 Gm15192-201ENSMUST00000121005 293 ntBASIC7.86□□□□□ -1.15
NcanP55066 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Gm18006-201ENSMUST00000177411 662 ntBASIC7.86□□□□□ -1.15
NcanP55066 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
NcanP55066 Mir6903-201ENSMUST00000183597 88 ntBASIC7.86□□□□□ -1.15
NcanP55066 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
NcanP55066 Gm18728-201ENSMUST00000186155 753 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms