Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Col18a1P39061 Gm37755-201ENSMUST00000195880 2179 ntBASIC9.61□□□□□ -0.87
Col18a1P39061 Gm9521-201ENSMUST00000206656 1516 ntBASIC9.61□□□□□ -0.87
Col18a1P39061 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Col18a1P39061 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Col18a1P39061 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Col18a1P39061 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Gm8107-201ENSMUST00000117477 2009 ntBASIC9.61□□□□□ -0.87
Col18a1P39061 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Col18a1P39061 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Col18a1P39061 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm14580-201ENSMUST00000119122 718 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm5456-201ENSMUST00000170706 844 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm17045-201ENSMUST00000178600 844 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm29288-201ENSMUST00000191582 901 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm37866-201ENSMUST00000191950 696 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm45574-201ENSMUST00000210921 331 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm7252-201ENSMUST00000223284 456 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 AC154795.1-201ENSMUST00000225611 364 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm8526-201ENSMUST00000079153 475 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 n-R5s97-201ENSMUST00000082585 113 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm44101-201ENSMUST00000203951 2221 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm37446-201ENSMUST00000193015 4136 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm43311-201ENSMUST00000200016 2377 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 AC134577.3-201ENSMUST00000226490 3000 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm36938-201ENSMUST00000191612 2696 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 AC117608.1-201ENSMUST00000225500 3418 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Tsr2-201ENSMUST00000026295 3804 ntTSL 2 BASIC9.6□□□□□ -0.87
Col18a1P39061 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm12307-201ENSMUST00000120581 590 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm13899-201ENSMUST00000121519 1255 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC9.6□□□□□ -0.87
Col18a1P39061 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm37187-201ENSMUST00000193425 341 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm38018-201ENSMUST00000195651 540 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 AC113031.1-201ENSMUST00000227400 432 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm26442-201ENSMUST00000082588 153 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Gm24924-201ENSMUST00000084007 164 ntBASIC9.6□□□□□ -0.87
Col18a1P39061 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Col18a1P39061 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Col18a1P39061 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Col18a1P39061 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC9.59□□□□□ -0.87
Col18a1P39061 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col18a1P39061 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm37161-201ENSMUST00000191994 2697 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Gm14893-201ENSMUST00000117904 282 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Gm11343-201ENSMUST00000120579 599 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm27512-201ENSMUST00000175328 126 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Gm26729-201ENSMUST00000180744 352 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Col18a1P39061 Gm37295-201ENSMUST00000192186 109 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Gm43141-201ENSMUST00000199695 274 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Gm43945-201ENSMUST00000203595 754 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 AC165292.1-201ENSMUST00000215218 620 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 AC159205.4-201ENSMUST00000225964 704 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Gm5612-201ENSMUST00000053326 375 ntBASIC9.59□□□□□ -0.87
Col18a1P39061 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Col18a1P39061 AW822073-201ENSMUST00000075305 555 ntBASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms