Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC7.91□□□□□ -1.14
Usp4P35123 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.91□□□□□ -1.14
Usp4P35123 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.91□□□□□ -1.14
Usp4P35123 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 Gm18378-201ENSMUST00000216245 628 ntBASIC7.91□□□□□ -1.14
Usp4P35123 Gm8058-201ENSMUST00000217247 587 ntBASIC7.91□□□□□ -1.14
Usp4P35123 Gm46379-201ENSMUST00000222551 265 ntBASIC7.91□□□□□ -1.14
Usp4P35123 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.91□□□□□ -1.14
Usp4P35123 Gm7086-202ENSMUST00000228849 506 ntBASIC7.91□□□□□ -1.14
Usp4P35123 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Usp4P35123 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Usp4P35123 Olfr890-201ENSMUST00000079804 945 ntBASIC7.91□□□□□ -1.14
Usp4P35123 Gm26437-201ENSMUST00000082595 105 ntBASIC7.91□□□□□ -1.14
Usp4P35123 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Usp4P35123 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.91□□□□□ -1.14
Usp4P35123 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Usp4P35123 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Usp4P35123 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Usp4P35123 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Usp4P35123 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.9□□□□□ -1.14
Usp4P35123 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.9□□□□□ -1.14
Usp4P35123 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Gm8662-201ENSMUST00000118644 574 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm13988-201ENSMUST00000119363 288 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm14826-201ENSMUST00000121284 901 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm11233-201ENSMUST00000122357 634 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC7.9□□□□□ -1.14
Usp4P35123 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC7.9□□□□□ -1.14
Usp4P35123 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC7.9□□□□□ -1.14
Usp4P35123 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC7.9□□□□□ -1.14
Usp4P35123 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Usp4P35123 Mir8097-201ENSMUST00000185150 119 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC7.9□□□□□ -1.14
Usp4P35123 Gm7891-201ENSMUST00000190284 843 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm42965-201ENSMUST00000201254 250 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm44412-201ENSMUST00000203018 294 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Usp4P35123 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Usp4P35123 Gm5307-201ENSMUST00000204772 760 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 AC153561.1-201ENSMUST00000215943 469 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.9□□□□□ -1.14
Usp4P35123 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC7.9□□□□□ -1.14
Usp4P35123 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.9□□□□□ -1.14
Usp4P35123 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC7.9□□□□□ -1.14
Usp4P35123 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Usp4P35123 Gm10145-201ENSMUST00000077776 462 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Gm25852-201ENSMUST00000082790 130 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 Gm10705-201ENSMUST00000098980 461 ntBASIC7.9□□□□□ -1.14
Usp4P35123 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Usp4P35123 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.9□□□□□ -1.15
Usp4P35123 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.9□□□□□ -1.15
Usp4P35123 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Usp4P35123 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
Usp4P35123 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC7.89□□□□□ -1.15
Usp4P35123 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Usp4P35123 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Usp4P35123 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Usp4P35123 Gm25273-201ENSMUST00000104295 115 ntBASIC7.89□□□□□ -1.15
Usp4P35123 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms