Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37627-201ENSMUST00000194585 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm34274-201ENSMUST00000195825 615 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.28□□□□□ -1.08
Col2a1P28481 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 CT009527.2-201ENSMUST00000225386 606 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.28□□□□□ -1.08
Col2a1P28481 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Col2a1P28481 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Col2a1P28481 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Col2a1P28481 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Col2a1P28481 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Col2a1P28481 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.08
Col2a1P28481 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Col2a1P28481 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC8.27□□□□□ -1.09
Col2a1P28481 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm12468-201ENSMUST00000116189 404 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Gm8812-201ENSMUST00000118496 412 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Col2a1P28481 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm24756-201ENSMUST00000177002 96 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm37328-201ENSMUST00000193191 640 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Gm43555-201ENSMUST00000196588 310 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Gm9357-201ENSMUST00000207138 805 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 AC152922.1-201ENSMUST00000216518 1232 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 AC154904.1-201ENSMUST00000219510 312 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Gm19238-201ENSMUST00000221936 1260 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Col2a1P28481 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm17841-201ENSMUST00000210711 2425 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Col2a1P28481 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.27□□□□□ -1.09
Col2a1P28481 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Gm43621-201ENSMUST00000202733 2022 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.27□□□□□ -1.09
Col2a1P28481 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Col2a1P28481 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Col2a1P28481 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 AC187103.1-201ENSMUST00000224641 1475 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm13732-201ENSMUST00000117753 535 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm14531-201ENSMUST00000120845 285 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm22275-201ENSMUST00000122470 310 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm2860-201ENSMUST00000199226 707 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm44279-201ENSMUST00000205154 472 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 AC163621.1-201ENSMUST00000220695 379 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.26□□□□□ -1.09
Col2a1P28481 AC159188.3-201ENSMUST00000224199 880 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.26□□□□□ -1.09
Col2a1P28481 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Col2a1P28481 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.26□□□□□ -1.09
Col2a1P28481 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 303.8 ms