Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hoxd9P28357 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Hoxd9P28357 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hoxd9P28357 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hoxd9P28357 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hoxd9P28357 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hoxd9P28357 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Rbm43-202ENSMUST00000102768 2106 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Fn3k-203ENSMUST00000103014 3841 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 AC124746.1-201ENSMUST00000227535 1300 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm5915-201ENSMUST00000116136 454 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm7910-201ENSMUST00000117896 835 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm13720-201ENSMUST00000120741 196 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm12180-201ENSMUST00000120905 661 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm14982-201ENSMUST00000121102 442 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm13440-201ENSMUST00000121665 496 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm13673-201ENSMUST00000122056 531 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm22949-201ENSMUST00000158562 105 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm25713-201ENSMUST00000158625 109 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm26468-201ENSMUST00000158644 106 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm25837-201ENSMUST00000158919 108 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm26933-201ENSMUST00000182320 827 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm19480-201ENSMUST00000185547 667 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm38110-201ENSMUST00000194594 1551 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Pisrt1-201ENSMUST00000195532 515 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm43711-201ENSMUST00000195994 373 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm6394-201ENSMUST00000197077 477 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm43848-201ENSMUST00000198060 1247 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm44277-201ENSMUST00000205128 649 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm6906-201ENSMUST00000218014 569 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC166358.1-201ENSMUST00000220677 105 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC153662.2-201ENSMUST00000221097 120 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC156037.2-201ENSMUST00000221284 112 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC166341.6-201ENSMUST00000221528 105 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AL645704.1-201ENSMUST00000221642 604 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 CT030242.1-201ENSMUST00000221945 125 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC124772.2-201ENSMUST00000222049 154 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC134917.3-201ENSMUST00000222057 1283 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC153663.1-201ENSMUST00000222165 120 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 CT030157.1-201ENSMUST00000222355 148 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC150661.2-201ENSMUST00000222418 105 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC127242.2-201ENSMUST00000223138 148 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 AC139294.1-201ENSMUST00000226708 571 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Hoxd9P28357 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Fgfbp1-201ENSMUST00000061299 1161 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm44669-201ENSMUST00000207774 1969 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm12743-201ENSMUST00000126668 3700 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm37675-201ENSMUST00000192303 2847 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.82□□□□□ -1.16
Hoxd9P28357 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Hoxd9P28357 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hoxd9P28357 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxd9P28357 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxd9P28357 AC153152.1-201ENSMUST00000221105 2742 ntBASIC7.81□□□□□ -1.16
Hoxd9P28357 Fbxo9-201ENSMUST00000001402 1850 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxd9P28357 Gm43211-201ENSMUST00000196901 1899 ntBASIC7.81□□□□□ -1.16
Hoxd9P28357 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Hoxd9P28357 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxd9P28357 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxd9P28357 Gm13821-201ENSMUST00000202029 3201 ntBASIC7.81□□□□□ -1.16
Hoxd9P28357 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hoxd9P28357 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms