Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col13a1Q9R1N9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col13a1Q9R1N9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Gm6433-201ENSMUST00000118634 875 ntBASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Gm43799-201ENSMUST00000201845 579 ntBASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col13a1Q9R1N9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Col13a1Q9R1N9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col13a1Q9R1N9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.64■□□□□ 0.09
Col13a1Q9R1N9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col13a1Q9R1N9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Col13a1Q9R1N9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col13a1Q9R1N9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col13a1Q9R1N9 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.64■□□□□ 0.09
Col13a1Q9R1N9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col13a1Q9R1N9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Gm5417-201ENSMUST00000079706 384 ntBASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col13a1Q9R1N9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Gm2399-201ENSMUST00000104944 225 ntBASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Gm7860-201ENSMUST00000121190 879 ntBASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col13a1Q9R1N9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col13a1Q9R1N9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms