Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Gm6139-201ENSMUST00000079261 882 ntBASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rbfox1Q9JJ43 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rbfox1Q9JJ43 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Rbfox1Q9JJ43 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rbfox1Q9JJ43 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Gm27454-201ENSMUST00000185090 204 ntBASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rbfox1Q9JJ43 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rbfox1Q9JJ43 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rbfox1Q9JJ43 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rbfox1Q9JJ43 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rbfox1Q9JJ43 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms