Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Gm9103-201ENSMUST00000119371 405 ntBASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx2-4Q9EQM3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.02■□□□□ 0.64
Nkx2-4Q9EQM3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx2-4Q9EQM3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Nkx2-4Q9EQM3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Gm18101-201ENSMUST00000215769 548 ntBASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nkx2-4Q9EQM3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Gm14859-201ENSMUST00000117752 357 ntBASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nkx2-4Q9EQM3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 Ank2-226ENSMUST00000189368 339 ntBASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 Gm18032-201ENSMUST00000222541 538 ntBASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Nkx2-4Q9EQM3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-4Q9EQM3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nkx2-4Q9EQM3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-4Q9EQM3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms