Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nif3l1Q9EQ80 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nif3l1Q9EQ80 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nif3l1Q9EQ80 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nif3l1Q9EQ80 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nif3l1Q9EQ80 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nif3l1Q9EQ80 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nif3l1Q9EQ80 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Gm6365-201ENSMUST00000054711 744 ntBASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nif3l1Q9EQ80 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nif3l1Q9EQ80 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nif3l1Q9EQ80 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nif3l1Q9EQ80 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms