Protein–RNA interactions for Protein: Q9DCC3

Ccdc107, Coiled-coil domain-containing protein 107, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc107Q9DCC3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc107Q9DCC3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc107Q9DCC3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc107Q9DCC3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccdc107Q9DCC3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc107Q9DCC3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc107Q9DCC3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc107Q9DCC3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Gm9870-201ENSMUST00000063874 645 ntBASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc107Q9DCC3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc107Q9DCC3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc107Q9DCC3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc107Q9DCC3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc107Q9DCC3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc107Q9DCC3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc107Q9DCC3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms