Protein–RNA interactions for Protein: Q9DAW6

Prpf4, U4/U6 small nuclear ribonucleoprotein Prp4, mousemouse

Known RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4Q9DAW6 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf4Q9DAW6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.21■□□□□ 0.67
Prpf4Q9DAW6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf4Q9DAW6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf4Q9DAW6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf4Q9DAW6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf4Q9DAW6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf4Q9DAW6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 Fst-202ENSMUST00000223640 2612 ntBASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Prpf4Q9DAW6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Gm27801-201ENSMUST00000184174 223 ntBASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Prpf4Q9DAW6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf4Q9DAW6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Gm8969-201ENSMUST00000199694 526 ntBASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf4Q9DAW6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.16■□□□□ 0.66
Prpf4Q9DAW6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Gm11421-201ENSMUST00000122124 294 ntBASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Gm43137-201ENSMUST00000198052 594 ntBASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Prpf4Q9DAW6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.14■□□□□ 0.66
Prpf4Q9DAW6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf4Q9DAW6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf4Q9DAW6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Prpf4Q9DAW6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Prpf4Q9DAW6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf4Q9DAW6 Smad6-203ENSMUST00000179458 273 ntBASIC19.14■□□□□ 0.65
Prpf4Q9DAW6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf4Q9DAW6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf4Q9DAW6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf4Q9DAW6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms