Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf3c6Q9D8P7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf3c6Q9D8P7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf3c6Q9D8P7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf3c6Q9D8P7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf3c6Q9D8P7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf3c6Q9D8P7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf3c6Q9D8P7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf3c6Q9D8P7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 Gm5874-201ENSMUST00000096101 508 ntBASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf3c6Q9D8P7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Gm42642-201ENSMUST00000200683 355 ntBASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf3c6Q9D8P7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf3c6Q9D8P7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gtf3c6Q9D8P7 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.64■□□□□ 0.74
Gtf3c6Q9D8P7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gtf3c6Q9D8P7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Gm18671-201ENSMUST00000214826 683 ntBASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gtf3c6Q9D8P7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf3c6Q9D8P7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Gm7514-201ENSMUST00000209475 934 ntBASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf3c6Q9D8P7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Gtf3c6Q9D8P7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms