Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d6Q9D413 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d6Q9D413 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d6Q9D413 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh2d6Q9D413 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d6Q9D413 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d6Q9D413 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d6Q9D413 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.31■□□□□ 0.04
Sh2d6Q9D413 BC021767-201ENSMUST00000126387 1716 ntBASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d6Q9D413 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d6Q9D413 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh2d6Q9D413 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d6Q9D413 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Gm26524-201ENSMUST00000192339 390 ntBASIC15.27■□□□□ 0.04
Sh2d6Q9D413 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d6Q9D413 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.27■□□□□ 0.03
Sh2d6Q9D413 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.27■□□□□ 0.03
Sh2d6Q9D413 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms