Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Snrnp48Q9D361 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp48Q9D361 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Snrnp48Q9D361 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Snrnp48Q9D361 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp48Q9D361 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp48Q9D361 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Snrnp48Q9D361 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp48Q9D361 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp48Q9D361 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp48Q9D361 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Snrnp48Q9D361 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Snrnp48Q9D361 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Gm7290-201ENSMUST00000104990 617 ntBASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Gm12918-201ENSMUST00000120234 636 ntBASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Gm15710-201ENSMUST00000121821 636 ntBASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Gm5075-201ENSMUST00000196916 622 ntBASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Snrnp48Q9D361 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Snrnp48Q9D361 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Snrnp48Q9D361 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Snrnp48Q9D361 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snrnp48Q9D361 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.37■□□□□ 0.53
Snrnp48Q9D361 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp48Q9D361 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp48Q9D361 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snrnp48Q9D361 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Snrnp48Q9D361 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms