Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim42Q9D2H5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim42Q9D2H5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim42Q9D2H5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trim42Q9D2H5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim42Q9D2H5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim42Q9D2H5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.37■□□□□ 0.53
Trim42Q9D2H5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.36■□□□□ 0.53
Trim42Q9D2H5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim42Q9D2H5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim42Q9D2H5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim42Q9D2H5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim42Q9D2H5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim42Q9D2H5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim42Q9D2H5 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.35■□□□□ 0.53
Trim42Q9D2H5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.35■□□□□ 0.53
Trim42Q9D2H5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms