Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rita1Q9D1H0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rita1Q9D1H0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.04■□□□□ 0.32
Rita1Q9D1H0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rita1Q9D1H0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Gm27275-201ENSMUST00000184318 272 ntBASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rita1Q9D1H0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Gm44549-201ENSMUST00000208351 577 ntBASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rita1Q9D1H0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Rita1Q9D1H0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rita1Q9D1H0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rita1Q9D1H0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Gm12896-201ENSMUST00000118430 226 ntBASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Gm37856-201ENSMUST00000191634 999 ntBASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.01■□□□□ 0.31
Rita1Q9D1H0 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rita1Q9D1H0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rita1Q9D1H0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rita1Q9D1H0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.99■□□□□ 0.31
Rita1Q9D1H0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rita1Q9D1H0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.99■□□□□ 0.31
Rita1Q9D1H0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.99■□□□□ 0.31
Rita1Q9D1H0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.99■□□□□ 0.31
Rita1Q9D1H0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.99■□□□□ 0.31
Rita1Q9D1H0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rita1Q9D1H0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms