Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Gm10033-202ENSMUST00000211874 928 ntBASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Gm18671-201ENSMUST00000214826 683 ntBASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ndc80Q9D0F1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 Gm42642-201ENSMUST00000200683 355 ntBASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ndc80Q9D0F1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Gm8495-201ENSMUST00000188740 694 ntBASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ndc80Q9D0F1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Gm13534-201ENSMUST00000121169 513 ntBASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ndc80Q9D0F1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ndc80Q9D0F1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ndc80Q9D0F1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndc80Q9D0F1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms