Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ssr1Q9CY50 Gm7860-201ENSMUST00000121190 879 ntBASIC19.96■□□□□ 0.79
Ssr1Q9CY50 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssr1Q9CY50 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssr1Q9CY50 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ssr1Q9CY50 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssr1Q9CY50 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ssr1Q9CY50 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.94■□□□□ 0.78
Ssr1Q9CY50 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.93■□□□□ 0.78
Ssr1Q9CY50 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.92■□□□□ 0.78
Ssr1Q9CY50 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ssr1Q9CY50 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssr1Q9CY50 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssr1Q9CY50 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssr1Q9CY50 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssr1Q9CY50 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ssr1Q9CY50 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssr1Q9CY50 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssr1Q9CY50 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssr1Q9CY50 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ssr1Q9CY50 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.89■□□□□ 0.77
Ssr1Q9CY50 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms