Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Q9CR55 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.09■□□□□ 0.33
Q9CR55 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.09■□□□□ 0.33
Q9CR55 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.09■□□□□ 0.33
Q9CR55 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.09■□□□□ 0.33
Q9CR55 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.09■□□□□ 0.33
Q9CR55 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Q9CR55 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q9CR55 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q9CR55 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q9CR55 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.08■□□□□ 0.33
Q9CR55 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Q9CR55 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Q9CR55 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Q9CR55 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Q9CR55 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.08■□□□□ 0.32
Q9CR55 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CR55 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.08■□□□□ 0.32
Q9CR55 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Q9CR55 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CR55 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CR55 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CR55 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CR55 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CR55 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CR55 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Q9CR55 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.07■□□□□ 0.32
Q9CR55 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Q9CR55 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Q9CR55 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.06■□□□□ 0.32
Q9CR55 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.06■□□□□ 0.32
Q9CR55 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.06■□□□□ 0.32
Q9CR55 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.06■□□□□ 0.32
Q9CR55 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Q9CR55 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q9CR55 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CR55 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CR55 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.05■□□□□ 0.32
Q9CR55 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CR55 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.05■□□□□ 0.32
Q9CR55 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CR55 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CR55 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CR55 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.05■□□□□ 0.32
Q9CR55 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Q9CR55 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Q9CR55 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.05■□□□□ 0.32
Q9CR55 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Q9CR55 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Q9CR55 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.05■□□□□ 0.32
Q9CR55 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Q9CR55 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q9CR55 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Q9CR55 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Q9CR55 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Q9CR55 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.04■□□□□ 0.32
Q9CR55 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.04■□□□□ 0.32
Q9CR55 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Q9CR55 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Q9CR55 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Q9CR55 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Q9CR55 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Q9CR55 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.04■□□□□ 0.32
Q9CR55 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms