Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldnd1Q9CQX5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cldnd1Q9CQX5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cldnd1Q9CQX5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cldnd1Q9CQX5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cldnd1Q9CQX5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cldnd1Q9CQX5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cldnd1Q9CQX5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Gm23634-201ENSMUST00000175071 91 ntBASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cldnd1Q9CQX5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Gm10517-202ENSMUST00000192970 758 ntBASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cldnd1Q9CQX5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 Gm18959-201ENSMUST00000208954 655 ntBASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cldnd1Q9CQX5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cldnd1Q9CQX5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cldnd1Q9CQX5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Gm10013-201ENSMUST00000106074 672 ntBASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cldnd1Q9CQX5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cldnd1Q9CQX5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms