Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lysmd3Q99LE3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Lysmd3Q99LE3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.14■□□□□ 0.65
Lysmd3Q99LE3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Lysmd3Q99LE3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd3Q99LE3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd3Q99LE3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd3Q99LE3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd3Q99LE3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lysmd3Q99LE3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd3Q99LE3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd3Q99LE3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Gm37856-201ENSMUST00000191634 999 ntBASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Gm44549-201ENSMUST00000208351 577 ntBASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd3Q99LE3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Gm12896-201ENSMUST00000118430 226 ntBASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Gm20760-201ENSMUST00000179197 648 ntBASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd3Q99LE3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd3Q99LE3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Lysmd3Q99LE3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lysmd3Q99LE3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Lysmd3Q99LE3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lysmd3Q99LE3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.08■□□□□ 0.65
Lysmd3Q99LE3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lysmd3Q99LE3 Gm27275-201ENSMUST00000184318 272 ntBASIC19.08■□□□□ 0.64
Lysmd3Q99LE3 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.08■□□□□ 0.64
Lysmd3Q99LE3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lysmd3Q99LE3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms