Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc1bQ920F6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc1bQ920F6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc1bQ920F6 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.17■□□□□ 0.98
Smc1bQ920F6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.17■□□□□ 0.98
Smc1bQ920F6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc1bQ920F6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc1bQ920F6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc1bQ920F6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc1bQ920F6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc1bQ920F6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc1bQ920F6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smc1bQ920F6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Smc1bQ920F6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
Smc1bQ920F6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smc1bQ920F6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smc1bQ920F6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Smc1bQ920F6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Gm15565-201ENSMUST00000118890 427 ntBASIC21.14■□□□□ 0.97
Smc1bQ920F6 Gm11643-201ENSMUST00000119578 864 ntBASIC21.14■□□□□ 0.97
Smc1bQ920F6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc1bQ920F6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.13■□□□□ 0.97
Smc1bQ920F6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smc1bQ920F6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Dio3-201ENSMUST00000097228 1449 ntBASIC21.12■□□□□ 0.97
Smc1bQ920F6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc1bQ920F6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms