Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdha9Q91Y11 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha9Q91Y11 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha9Q91Y11 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha9Q91Y11 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha9Q91Y11 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdha9Q91Y11 Gm13148-201ENSMUST00000118892 745 ntBASIC19.66■□□□□ 0.74
Pcdha9Q91Y11 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdha9Q91Y11 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.66■□□□□ 0.74
Pcdha9Q91Y11 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha9Q91Y11 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha9Q91Y11 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Pcdha9Q91Y11 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha9Q91Y11 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.65■□□□□ 0.74
Pcdha9Q91Y11 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha9Q91Y11 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha9Q91Y11 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdha9Q91Y11 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha9Q91Y11 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdha9Q91Y11 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdha9Q91Y11 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Gm22325-201ENSMUST00000158904 308 ntBASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha9Q91Y11 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Gm10602-201ENSMUST00000098239 609 ntBASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha9Q91Y11 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha9Q91Y11 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha9Q91Y11 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha9Q91Y11 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha9Q91Y11 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdha9Q91Y11 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha9Q91Y11 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms