Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trex1Q91XB0 Zfp783-201ENSMUST00000095946 670 ntBASIC21.24■□□□□ 0.99
Trex1Q91XB0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trex1Q91XB0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trex1Q91XB0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trex1Q91XB0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trex1Q91XB0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.23■□□□□ 0.99
Trex1Q91XB0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.23■□□□□ 0.99
Trex1Q91XB0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trex1Q91XB0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.22■□□□□ 0.99
Trex1Q91XB0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Gm37055-201ENSMUST00000191866 133 ntBASIC21.21■□□□□ 0.99
Trex1Q91XB0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trex1Q91XB0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.2■□□□□ 0.98
Trex1Q91XB0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.2■□□□□ 0.98
Trex1Q91XB0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trex1Q91XB0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Gm15565-201ENSMUST00000118890 427 ntBASIC21.19■□□□□ 0.98
Trex1Q91XB0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.19■□□□□ 0.98
Trex1Q91XB0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trex1Q91XB0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trex1Q91XB0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Trex1Q91XB0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.18■□□□□ 0.98
Trex1Q91XB0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.18■□□□□ 0.98
Trex1Q91XB0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trex1Q91XB0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trex1Q91XB0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trex1Q91XB0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trex1Q91XB0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trex1Q91XB0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trex1Q91XB0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trex1Q91XB0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trex1Q91XB0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
Trex1Q91XB0 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.17■□□□□ 0.98
Trex1Q91XB0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trex1Q91XB0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trex1Q91XB0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trex1Q91XB0 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.17■□□□□ 0.98
Trex1Q91XB0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trex1Q91XB0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms