Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Tram1Q91V04 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.88■□□□□ 0.13
Tram1Q91V04 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tram1Q91V04 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tram1Q91V04 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tram1Q91V04 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tram1Q91V04 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tram1Q91V04 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.88■□□□□ 0.13
Tram1Q91V04 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Tram1Q91V04 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
Tram1Q91V04 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.88■□□□□ 0.13
Tram1Q91V04 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
Tram1Q91V04 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.88■□□□□ 0.13
Tram1Q91V04 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.88■□□□□ 0.13
Tram1Q91V04 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tram1Q91V04 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tram1Q91V04 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Tram1Q91V04 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tram1Q91V04 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.87■□□□□ 0.13
Tram1Q91V04 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tram1Q91V04 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Tram1Q91V04 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Tram1Q91V04 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Tram1Q91V04 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tram1Q91V04 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Tram1Q91V04 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.85■□□□□ 0.13
Tram1Q91V04 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.85■□□□□ 0.13
Tram1Q91V04 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.85■□□□□ 0.13
Tram1Q91V04 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Tram1Q91V04 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.85■□□□□ 0.13
Tram1Q91V04 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Tram1Q91V04 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tram1Q91V04 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.84■□□□□ 0.13
Tram1Q91V04 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tram1Q91V04 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.84■□□□□ 0.13
Tram1Q91V04 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tram1Q91V04 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tram1Q91V04 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Tram1Q91V04 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Tram1Q91V04 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Tram1Q91V04 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms