Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg1dQ8VE91 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg1dQ8VE91 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg1dQ8VE91 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Gm10653-202ENSMUST00000139570 835 ntBASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg1dQ8VE91 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg1dQ8VE91 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg1dQ8VE91 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg1dQ8VE91 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms